It's a straight up war. The EVE universe has entered a wormhole into the Halo Universe. The UNSC and Covenant join forces to defend their space against the merciless conquest of systems by the capsuleers. The flood gets pulled into the struggle as well. The forerunners also come to defend the Haloverse via space magic. Who wins? (The Jove Empire is not included.)
For those who have never seen/heard about/know anything about EVE Online, [url=https://www.youtube.com/watch?v=FZPCiqBLPM8]Here's a trailer that should help you understand it's universe[/url]
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Flood solo thanks to logic plague -blam!-ing with every electronic control system on every ship, and their infection of all organic beings on each ship... flood are -blam!-ing OP.