If you already have everything set up as intended and you're not using Cross-Save, then you can safely disregard the information box. If you are using Cross-Save, and have already been playing Shadowkeep fine, then you can still safely disregard the information box.
Bungie is still trying to help people make sure that they have Cross-Save enabled before logging in on the alternate characters after purchasing Shadowkeep to avoid the issue of that person applying their Season Passes to the wrong save data.
You may get the popup multiple times, especially during or after maintenance, when changes are made behind the scenes.
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Same issue here do I ignore the notification
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I just want to confirm that I did proceed again and I've still got all my stuff, so everything worked as expected :)
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other way around for me. it told me to re authenticate my steam account and when i did i'm now looking at 3 750 characters instead of 930s. it disabled the cross save for me i think when i authenticated the steam. boom. 90 days. -blam!-ing trash.
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I got the same thing today. It was not after a random disconnect though. I can confirm that my save file was intact though, no loss.