I consider myself a decent sniper, but when I go into Crucible, I'm wrecked beyond belief. There are guys who headshot me the very second they scope in. It's -blam!-ing ridiculous! I don't understand how they do it!
EDIT: A lot of people are saying that they get their skill from Halo. However, I actually snipe very well in Halo, but not-so-well in Destiny.
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Could be that you are encountering the final round perk on the snipers that mean if they hit you anywhere with the final bullet in the round they will one hit you.